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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:26:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 2.
LR862381.2:11007312-11007332
TTTTATTTAATTTTTTTAATATTATTAAAA11007312ATTTCCATCTCCTCCTCTTCTCCCTCATACCTCCCCTCCCCTTCACCCATA
Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:120668130-120668150
TTGATTTTTTTTCTCATTTTTTTATTAAAA120668130ATTTCCATCTCCTCCTCTTCTCCTCCCCCTTCCCTCCCCTCCCTTCCACCC
Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:159784404-159784424
TTTTCATGGTTTATTTTTTTATATTTAAAA159784404ATTTCCATCTCCTCCTCTTCTCCTCCCCCTTCCCTCCCCTCCCCTCCACCC
Arvicola amphibius genome assembly, chromosome: 6.
LR862385.2:9384245-9384265
ATGGCATTTTTATTATTATTATTATTAAAA9384245ATTTCCATCTCCTCCTCTTCTCCATTTCCCTCCCCTCCCCTCCACCCCCTC
Arvicola amphibius genome assembly, chromosome: 6.
LR862385.2:67297740-67297760
CTTCTTTTTTTCCCTCATTTTTTATTAAAA67297740ATTTCCATCTCCTCCTCTTCTCCTCCCCCTCCCCTTCCCTCCCTTCCACCC
Arvicola amphibius genome assembly, chromosome: 6.
LR862385.2:68789548-68789568
GCATTTTTTAATATAATTTTTTTATTAAAA68789548ATTTCCATCTCCTCCTCTTCTCCTCCCCCTTCCACCCATACCCCAACTCCC
Arvicola amphibius genome assembly, chromosome: X.
LR862387.1:46072397-46072417
TTTTTTAATGGTTTTTTTTTATATTTAAAA46072397ATTTCCATCTCCTCCTCTTCTCGTCCCCCTTCCCCTCCCTCCTCCTCTCCA
Arvicola amphibius genome assembly, chromosome: 11.
LR862391.2:112190493-112190513
TTTTAATGGTTTTTTTTTTTATATTTAAAA112190493ATTTCCATCTCCTCCTCTTCTCCTTCCCCTTCCTTCCCCTCCCCTCTACCC
Arvicola amphibius genome assembly, chromosome: 18.
LR862398.1:11613535-11613555
TAATTTTTCCTCCTCATTTTTTATTAAAAA11613535ATTTCCATCTCCTCCTCTTCTCCTCCTCCTCCCCTCCCCTCCCCTCCCTTC
Micromys minutus genome assembly, chromosome: 6.
OZ004786.1:32340325-32340345
TTTTCTTTTTTTTTTTACTGCCTTTTCTTT32340325ATTTCCATCTCCTCCTCTTCTTCCTCAACTTCTTCCTCAAGAGAAGACTTC
uncultured Methanoregula sp. isolate 40c00975-8508-4419-bb0e-c14120047957 genome assembly, chromosome: 16.
OY762755.1:140966-140986
GGAAAGAGAATGCCGACCTGCTCGCCGATT140966ATTTCCATCTCCTCCTCTTCTATTTCCGTGAGGGTGAATCGGGTCGTGCAA
EST11018497 CM-VEa library Cucumis melo cDNA clone VEa0015N16, mRNA sequence.
JG476784.1:69-89
AACATCGATCAAGATTCTAATTAAACAAAG69ATTTCCATCTCCTCCTCTTCTCTTCTTTCTTTCCACTTCAACTTCACTTTA
Phoenix dactylifera cultivar Khalas clone BAC GN4XO5202_S12, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces.
JX110172.1:58393-58413
TTCCCCTCACCACCATTGTTGCCATCCTCC58393ATTTCCATCTCCTCCTCTTCTGCCCTCCTTCCCCTGTTCTTCTTCTTCCTC
Cucumis melo genomic scaffold, anchoredscaffold00029.
LN681861.1:3982698-3982718
AACATCGATCAAGATTCTAATTAAACAAAG3982698ATTTCCATCTCCTCCTCTTCTCTTCTTTCTTTCCACTTCAACTTCACTTTA
Ligustrum vulgare genome assembly, chromosome: 8.
OY743175.1:23712206-23712226
TCACCAACCTTCTCACCTTCAACAACATCC23712206ATTTCCATCTCCTCCTCTTCTTCAATGGATGGTCAAGTAGTGGGTCCCTAA
Patella pellucida genome assembly, chromosome: 3.
OU795038.1:86752993-86753013
TCTAAATTCTTACCTTTTTTTTCTGTCCAT86752993ATTTCCATCTCCTCCTCTTCTTCTCCTTCTTCGTCCGATTCTTCACTCGAT
Diabrotica virgifera virgifera genome assembly, chromosome: 10.
OU830633.1:13862918-13862938
TGATTTAGGTACTTCTAAAATTTATAATGG13862918ATTTCCATCTCCTCCTCTTCTTCTGTCTCAGATTCGTTGTCCAGTCTGATT
Branchiostoma lanceolatum genome assembly, chromosome: 13.
OV696698.1:14449734-14449754
TTCGATGACTACTTTCCATTCTGCATGTCC14449734ATTTCCATCTCCTCCTCTTCTTCCTCTACACCACCTTTGAGAGACAAAAAC
Euclidia mi genome assembly, chromosome: 4.
OX123184.2:43796516-43796536
TGTCTTTTTTTCTATAGAATTTCTCGTATT43796516ATTTCCATCTCCTCCTCTTCTTGCGTGTCTAATGCGACTTGAGTTGCTTAG
Arvicola amphibius genome assembly, chromosome: 2.
LR862381.2:72804906-72804926
GGGGGTATTTGTGGAGGAGAGGGAAGTGGG72804906AGAAGAGGAGGAGATGGAAATTTTTAATAAAAATAAAATAAATAAAAAATT
Arvicola amphibius genome assembly, chromosome: 3.
LR862382.1:64035199-64035219
GGATGGAAGGGAGGGGAGAGAAGGGGGATG64035199AGAAGAGGAGGAGATGGAAATTTTTAATAAAAAAATGAGAAAGAAAAAAGT
Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:100369209-100369229
GGGTGGAGGGGAGGGGAGGGAAGGGGGAGG100369209AGAAGAGGAGGAGATGGAAATTTTTAAATATAAAAAAATAAACCATAAAAA
Arvicola amphibius genome assembly, chromosome: 9.
LR862389.2:78474283-78474303
TATGGGTGGAGGGGAGGGGAGGGAAGTGGG78474283AGAAGAGGAGGAGATGGAAATTTTTAATAAAAAAATAAAAAATAATAAACC
Arvicola amphibius genome assembly, chromosome: 9.
LR862389.2:88290795-88290815
GGGTGGAGGGGAGGGGAGGGAAGGGGGAGG88290795AGAAGAGGAGGAGATGGAAATTTTTAAATATAAAAAAAATAAAAAAACTGA
Arvicola amphibius genome assembly, chromosome: 12.
LR862392.2:75263356-75263376
GGGTGGAGGAGAGGGAAGGGAAGGGGGAGG75263356AGAAGAGGAGGAGATGGAAATATATAAAATTAAAAGATTAAAAAAATTTTC
Arvicola amphibius genome assembly, chromosome: 18.
LR862398.1:29984745-29984765
GGATGGAAGGGAGGGGAGGGAAGGGGGAGG29984745AGAAGAGGAGGAGATGGAAATCTTGAATAAAAAAATGAGAAAAAAAAATCA
Microcaecilia unicolor genome assembly, chromosome: 6.
LR594637.1:286281521-286281541
AGTGCTATAGAAATATTTACTAGTAGTAGA286281521AGAAGAGGAGGAGATGGAAATATGCTGGACCTGGGATTGGTGGGAAGGGAG
Myripristis murdjan genome assembly, chromosome: 10.
LR597559.1:31116657-31116677
AAACTTCTGTATAGGCATACAGATGAAGGG31116657AGAAGAGGAGGAGATGGAAATTCATCCCCTCTCCAAATGATTGTGCTCACA
Coregonus sp. 'balchen' genome assembly, chromosome: 33.
LR778285.1:43797492-43797512
AGCCCGTCTGCGCGCTCGAGAAAGGAATAA43797492AGAAGAGGAGGAGATGGAAATGCATGGTGGTGAGATATTCTGTATAGCTAA
Trachurus trachurus genome assembly, chromosome: 9.
LR991632.1:36452164-36452184
GGATGAAGAGGATGAAGAGGAAGAAGAGGA36452164AGAAGAGGAGGAGATGGAAATGAGGCGAGACAGAAAAGGCGATGATTAAAC
TSA: Strongylocentrotus purpuratus WHL22.635583.0 mRNA sequence.
JT111646.1:1655-1675
GAGGATCCAGGAGGGGATAGAGGGATAGTA1655AGAAGAGGAGGAGATGGAAATGGAGCCACGGAGCGAAGAGAGGATGGATTG
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:115114380-115114400
GAGGATATCAAAGAAATTCATATGAGAAAA115114380AGAAGAGGAGGAGATGGAAATGAAGGTGGTGGTGTGGTGGTAGTAACAACG
Cucumis melo isolate PI 511890 chromosome 7.
CP136106.1:161082-161102
TAAAGTGAAGTTGAAGTGGAAAGAAAGAAG161082AGAAGAGGAGGAGATGGAAATCTTTGTTTAATTAGAATCTTGATCGATGTT
Cucumis melo genomic chromosome, chr_7.
LN713261.1:136024-136044
TAAAGTGAAGTTGAAGTGGAAAGAAAGAAG136024AGAAGAGGAGGAGATGGAAATCTTTGTTTAATTAGAATCTTGATCGATGTT
Opisthograptis luteolata genome assembly, chromosome: 17.
OV928050.1:3707599-3707619
GGCCAAACCTGTTGAAGAAGAGGTTGTCGA3707599AGAAGAGGAGGAGATGGAAATGGAACGTGAACTAACGGTATGATAATATAA
Buathra laborator genome assembly, chromosome: 3.
OW203894.1:20207039-20207059
GTCCGGCAGCGATAGTAATAGCGACGACGA20207039AGAAGAGGAGGAGATGGAAATTGACGATAAATAGATTCTCTTCGTAAACTT
Euclidia mi genome assembly, chromosome: 4.
OX123184.2:48143539-48143559
CGAAGCGACTCAAGTAGCATTAGACACGCA48143539AGAAGAGGAGGAGATGGAAATAATGCCAGAAATTCAAAAGATAGAAAAAAA
Rhagonycha lutea genome assembly, chromosome: 4.
OY294039.1:10263684-10263704
TAGAAAAAAACGAAAGAATAAAGTAATGGA10263684AGAAGAGGAGGAGATGGAAATTGAAGTTTTTGAAAACAAGAATGGAAAGCT
Toxonevra muliebris genome assembly, chromosome: 4.
OY829329.1:78961101-78961121
ACGATTTACGCTCGATTGCAATAATGCGAA78961101AGAAGAGGAGGAGATGGAAATGAAAATCGAAATGGAGATGGAGGTAACTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTCCATCTCCTCCTCTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTCCATCTCCTCCTCTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.245 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTCCATCTCCTCCTCTTCT&k=0&no_gap=0&offset=0&limit=50
0.316 | 0.071 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAGAGGAGGAGATGGAAAT&k=0&no_gap=0&offset=0&limit=31
0.329 | 0.013 | cgi_end;

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